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UNLABELLED: SIMBioMS is a web-based open source software system for managing data and information in biomedical studies. It provides a solution for the collection, storage, management and retrieval of information about research subjects and biomedical samples, as well as experimental data obtained using a range of high-throughput technologies, including gene expression, genotyping, proteomics and metabonomics. The system can easily be customized and has proven to be successful in several large-scale multi-site collaborative projects. It is compatible with emerging functional genomics data standards and provides data import and export in accepted standard formats. Protocols for transferring data to durable archives at the European Bioinformatics Institute have been implemented. AVAILABILITY: The source code, documentation and initialization scripts are available at http://simbioms.org.

Original publication

DOI

10.1093/bioinformatics/btp420

Type

Journal article

Journal

Bioinformatics

Publication Date

15/10/2009

Volume

25

Pages

2768 - 2769

Keywords

Computational Biology, Database Management Systems, Databases, Factual, Information Management, Information Storage and Retrieval, Software